Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919468.1_cds_XP_016468684.1_61294
CDS Infomation

[gene=LOC107791181] [db_xref=GeneID:107791181] [protein=mechanosensitive ion channel protein 6-like] [protein_id=XP_016468684.1] [location=complement(join(46618..46903,47338..47540,47630..47923,48327..48450,49007..50706))] [gbkey=CDS]
Sequence

ATGGACAAACTTAGAAAATCCTTTAAATCTCTTTCCCCTGATAATACTAAAAACACTTCT
TCACAGTCTGAAGAAGAACACCAAGTTCTCTTGAACCAAACTGAAAAAGAAGAAAAAACC
AATTTTACTATGACTTCTTCTTCCCCTGCTATGGATACATCCGATGCTATGGACGTTATT
GTCAAAATTAACACCAGAGAAACCCCAAAAGGTCTTAAAGATACTGAACTTTCCTCTTCT
TCAAAATCCCAGTTCAGTAAAAATGGTGGCAGCACTAACAGTAAAACGTGGAGAGATTCC
AGTTATGATTTTACAAATGATGATGTTATGAAAGAACAATGGAGTAGTAACAAAGATTTT
GACTTTGTAACGGAGTCGCCGTTATCTAGAGTTAATGAAGAGAGTCCCAACAACGGCGGC
GGCGTTCTTACACCGAGGGATGTTAAGGTTTCGTTTAACGATCACCTTAACGAAACAAAA
CGCCGCCGTTCTAATGCTAGTGATGGAGAAGCTGGTGTACAAGATGAAGTTTTATTATGC
AGTTCTTCCACCTCTTCATTCAGGTCAAAATCGAGTCTTTTGAAAACGAAGACAAAATCA
AGATTAATGGACCCACCTGAACAAGATCATAAGTCTCAGAAGATGACAATGAAATCTGGG
TTTTTGGGAAAAGGTAGTGAAATTGATGAAGAGGATCCTTTTTGGGATGAGGATTTACCT
GAGCAATATAAGAAGATGAAGTTCAGTACATTGAGTGTTCTTCAGTTGGTAAGTTTGATT
TTGATTATTGCTGCTTTAGTTTGTAGTTTAACAATTCGAGTATTAAGGGAAAAGAGAGTC
TTTGAGCTTGAATTGTGGAAATGGGAGTTAATGGTTTTGGTGTTGATTTCTGGGAGATTG
GTTTCTGGTTGGTTCATTAGGATTGCGGTTTACTTCATTGAGCGTAATTTTTTGTGGCGA
AAGCGGGTTTTATATTTTGTTTATGGATTGAGGAATGCAGTGCAGAATTGTATTTGGTTG
AGTTTTGTGTTGATAGCTTGGCAATCTATTTTTGATAAGAAAGTTGAGAGGGTGACCCAT
GGGAAGGTTTTACCTTACGTGTCTCGCGTTTGGGTGTGTCTTTTGGTTGGTACATTCATT
TGGCTGCTGAAAACTCTACTTGTAAAGGTGCTGGCTATGTCATTTCATGTTACTGCATTC
TTTGATCGGATTCAAGAATCTTTGTTTAATCAGTATGTGATTGAGACGTTGTCTGGGCCA
CCGTTTGTTGAAATTGAGAACGAACAAGAGGAGGAGGAAAAAGTTATGGCTGAGGTGCAG
AAGCTTCAGAATGCTGGAGCTACATTGCCTGCTGATCTAAAAGCAGCCATATTACAGAAG
AGACCAATTGGAACAGCACGGACGAGTCCCACGTCTGCTATTGCAAGGAGTCCTGTTTTC
TCCAGGGTCATGTCGAAGAAGGAAAAGGAAGAAGAAGGGGGTATCACTATAGATCATCTG
CATAGGTTGAATCAGAAGAACATTTCAGCTTGGAATATGAAAAGATTGACAAATATTGTT
AGGAAAGGGGTGCTGTCAACTCTGCATGATCAGCTACAGGAATCAACAGATGAGGGTGAA
TCTGTAGAGATCACAAGTGAAAAACTGGCTAAAGTTGCAGCGAGGAAGATATTTAACAAT
GTGGCTAAGCCTGGCTCCAAGTTCATTTATCTGGAGGATTTTATGCGTTTTATGAGAGAA
GATGAGGCTCTGAAAACAATACGCCTCTTTGAAGGTGGAACTGAAGCCAAAGGTGTCAGT
AAACGGGCTTTAAAAACTTGGGTGGTGAATGCATTTAGAGAACGAAGAGCTCTTGCTTTG
TCTTTGAATGATACAAAGACTGCTGTGAAGAAACTGCATCAGATGTTGAATGTCCTTGTG
GCAGTTATCATAGTGGTCATTTGGCTCCTTATACTGAGAGTTGCCAACACACATTTCTTG
GTTTTGATGAGTTCCCAAGTTCTACTGGTGGTATTCATGTTCGGAAACTCAGCCAAGACA
ACCTTTGAGGCAATCATTTTTTTATTCGTCATGCACCCATTTGATGTAGGTGATCGTCTT
GAAGTCGAAGGAGTTCAGATGATAGTCGAAGAGATGAATATATTGACGACAGTTTTCCTG
AGATACGATAACCAGAAGATCATTTATCCAAACAGTGTCTTGTCTATGAAGCCCATAAGT
AATTACTATCGCAGTCCACACATGGGAGATGCAATTGACTTCTGCATTCATATTTCCACT
CCTATGGACAAGATTGCTGCAATGAAGGAGAAAATCACAAGGTTTGTCGACAACAAGAGC
GATCATTGGTATCCAGCTCCATTGATTGTAATGAGGGATGTGGAAGACTTAAACAGGATA
AAATGGTCAGTGTGGCTTTCGCATACAATGAATCACCAAGATATGGGAGAGAGATGGTCA
AGGAGAGCTCTTTTAGTTGAAGAGATGATAAGGATATTCAGGGAGCTTGATATTGAATAC
CGTATGCTGCCTCTTGATGTCAATGTTCGTAACTTGCCACCATTATCGTCGAGCAGAGTT
CCCTCTAACTGGACAATTTGTGCTTAG

Peptide Sequence

PEP ID

XP_016468684.1
PEP Infomation

PREDICTED: mechanosensitive ion channel protein 6-like [Nicotiana tabacum]
Sequence

MDKLRKSFKSLSPDNTKNTSSQSEEEHQVLLNQTEKEEKTNFTMTSSSPAMDTSDAMDVI
VKINTRETPKGLKDTELSSSSKSQFSKNGGSTNSKTWRDSSYDFTNDDVMKEQWSSNKDF
DFVTESPLSRVNEESPNNGGGVLTPRDVKVSFNDHLNETKRRRSNASDGEAGVQDEVLLC
SSSTSSFRSKSSLLKTKTKSRLMDPPEQDHKSQKMTMKSGFLGKGSEIDEEDPFWDEDLP
EQYKKMKFSTLSVLQLVSLILIIAALVCSLTIRVLREKRVFELELWKWELMVLVLISGRL
VSGWFIRIAVYFIERNFLWRKRVLYFVYGLRNAVQNCIWLSFVLIAWQSIFDKKVERVTH
GKVLPYVSRVWVCLLVGTFIWLLKTLLVKVLAMSFHVTAFFDRIQESLFNQYVIETLSGP
PFVEIENEQEEEEKVMAEVQKLQNAGATLPADLKAAILQKRPIGTARTSPTSAIARSPVF
SRVMSKKEKEEEGGITIDHLHRLNQKNISAWNMKRLTNIVRKGVLSTLHDQLQESTDEGE
SVEITSEKLAKVAARKIFNNVAKPGSKFIYLEDFMRFMREDEALKTIRLFEGGTEAKGVS
KRALKTWVVNAFRERRALALSLNDTKTAVKKLHQMLNVLVAVIIVVIWLLILRVANTHFL
VLMSSQVLLVVFMFGNSAKTTFEAIIFLFVMHPFDVGDRLEVEGVQMIVEEMNILTTVFL
RYDNQKIIYPNSVLSMKPISNYYRSPHMGDAIDFCIHISTPMDKIAAMKEKITRFVDNKS
DHWYPAPLIVMRDVEDLNRIKWSVWLSHTMNHQDMGERWSRRALLVEEMIRIFRELDIEY
RMLPLDVNVRNLPPLSSSRVPSNWTICA

Transcript Sequence

Gene sequence data has not been registered.